BioactivityDataAcquisition

SatoryKono/BioactivityDataAcquisition

BioETL is a data processing framework for acquiring, normalizing, and validating bioactivity-related datasets from multiple external sources.

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Python

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Installation

Option 1: Use slash command in Claude Code

/install-skill https://github.com/SatoryKono/BioactivityDataAcquisition

Option 2: Clone to skills directory

# Global (all projects)

git clone https://github.com/SatoryKono/BioactivityDataAcquisition ~/.claude/skills/BioactivityDataAcquisition

# Project-specific

git clone https://github.com/SatoryKono/BioactivityDataAcquisition .claude/skills/BioactivityDataAcquisition

Add MCP server to .cursor/mcp.json:

{
  "mcpServers": {
    "skillz": {
      "command": "npx",
      "args": ["-y", "skillz-mcp", "https://github.com/SatoryKono/BioactivityDataAcquisition"]
    }
  }
}

Restart Cursor after adding the configuration.

Option 1: Use Gemini CLI command

gemini extensions install https://github.com/SatoryKono/BioactivityDataAcquisition

Option 2: Clone to extensions directory

git clone https://github.com/SatoryKono/BioactivityDataAcquisition ~/.gemini/extensions/BioactivityDataAcquisition

Topics

bioactivity chembl cheminformatics data-pipeline data-quality delta-lake drug-discovery etl medallion-architecture pubchem python uniprot