nested-tad-detection

This skill detects hierarchical (nested) TAD structures from Hi-C contact maps (in .cool or mcool format) using OnTAD, starting from multi-resolution .mcool files. It extracts a user-specified chromosome and resolution, converts the data to a dense matrix, runs OnTAD, and organizes TAD calls and logs for downstream 3D genome analysis.

$ 설치

git clone https://github.com/BIsnake2001/ChromSkills /tmp/ChromSkills && cp -r /tmp/ChromSkills/31_toolBased.nested-tad-detection ~/.claude/skills/ChromSkills

// tip: Run this command in your terminal to install the skill